FastQCFastQC Report
Mon 25 Mar 2013
68.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 68.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 30696921
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1419514 4.624287888677825 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1299725 4.234056568735347 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1167893 3.8045933010675568 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1150048 3.746460434908114 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 898215 2.9260752242871524 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 490791 1.5988281039652152 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 396835 1.292751804000147 RNA PCR Primer, Index 1 (100% over 29bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 288674 0.9404005046629921 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 253610 0.8261740648190743 RNA PCR Primer, Index 1 (100% over 28bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 234339 0.763395781616013 RNA PCR Primer, Index 1 (100% over 33bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 229305 0.7469967427677845 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 218352 0.7113156397672588 RNA PCR Primer, Index 1 (100% over 27bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 216919 0.7066474191336649 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 192175 0.6260399862253286 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 174227 0.5675715815276718 RNA PCR Primer, Index 1 (100% over 27bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTT 173347 0.5647048445021571 RNA PCR Primer, Index 1 (97% over 35bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTA 167390 0.5452989894328489 RNA PCR Primer, Index 3 (100% over 36bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 159700 0.5202476170167034 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 148697 0.4844036312306371 RNA PCR Primer, Index 1 (100% over 27bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 142493 0.4641931352007584 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 117131 0.3815724710631402 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 116182 0.37848095579357943 RNA PCR Primer, Index 1 (100% over 29bp)
ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG 108155 0.35233175340289014 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 95528 0.3111973347424649 RNA PCR Primer, Index 1 (100% over 25bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT 95232 0.3102330686520645 RNA PCR Primer, Index 3 (100% over 34bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 94933 0.30925902959453166 RNA PCR Primer, Index 1 (100% over 29bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 91418 0.29780836977102687 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 91313 0.2974663159213916 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT 90681 0.2954074775121583 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 89492 0.29153412487200264 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 87053 0.28358870259333174 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 75117 0.24470532402907771 RNA PCR Primer, Index 1 (100% over 25bp)
GTCGCCATGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTTAGGCATC 69505 0.22642336017999984 RNA PCR Primer, Index 3 (100% over 42bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 67027 0.21835088932860724 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 66677 0.21721070982982302 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 63779 0.20777002357988936 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 62862 0.20478275329307458 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 62471 0.20350900991014703 RNA PCR Primer, Index 1 (100% over 30bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 60885 0.19834236795279891 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 60395 0.19674611665450092 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 58806 0.19156970173002041 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 58485 0.1905239942468497 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 57363 0.18686890453931845 RNA PCR Primer, Index 1 (100% over 25bp)
TCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 52787 0.17196187200664198 RNA PCR Primer, Index 1 (100% over 31bp)
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 52475 0.17094548342486857 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 51267 0.16701023532620746 RNA PCR Primer, Index 1 (100% over 31bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 45220 0.14731119124292627 RNA PCR Primer, Index 1 (100% over 24bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 44962 0.14647071606953674 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 43445 0.1415288523562347 RNA PCR Primer, Index 1 (100% over 26bp)
AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC 42065 0.1370332874753139 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 41667 0.13573674050241064 RNA PCR Primer, Index 1 (100% over 26bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 39965 0.13019221048260834 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 39783 0.12959931714324052 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 39408 0.12837769625168596 RNA PCR Primer, Index 1 (100% over 26bp)
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 38980 0.12698341960745835 RNA PCR Primer, Index 1 (100% over 25bp)
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 38336 0.12488548932969532 RNA PCR Primer, Index 1 (100% over 28bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 38044 0.12393425386213817 RNA PCR Primer, Index 1 (100% over 26bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 37307 0.12153336160326958 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 35419 0.11538290762125622 RNA PCR Primer, Index 1 (100% over 28bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 34579 0.112646476824174 RNA PCR Primer, Index 1 (100% over 29bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 33925 0.11051596998930284 RNA PCR Primer, Index 1 (100% over 32bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 33691 0.1097536785529728 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 33336 0.10859721077563446 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 33134 0.1079391643220504 RNA PCR Primer, Index 1 (100% over 25bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 32275 0.10514083806646277 RNA PCR Primer, Index 1 (100% over 26bp)
ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 30707 0.10003283391190929 RNA PCR Primer, Index 1 (100% over 30bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 31048290 28.175802 294.6014 26
TTCTC 30960045 27.21179 284.84277 28
ATTCT 30938920 26.706635 280.05368 27
TGCCA 31147580 25.20665 260.60617 36
GCCAA 29069080 24.731287 273.9057 37
CCAAG 28977255 24.653166 273.88104 38
AACTC 25286675 24.563852 311.7394 44
TCTCG 30950695 23.825203 248.31578 29
GAACT 29547930 23.484234 255.31146 43
GAATT 31074705 23.072264 241.60771 25
ACTCC 21884890 21.646648 316.99777 45
CTCGG 30823640 20.78073 217.3751 30
GGAAT 31146715 20.253778 211.56522 24
GTGCC 29975555 20.208965 217.40372 35
TGGAA 30939440 20.118996 211.55641 23
CAAGG 28777670 20.031597 224.14624 39
AAGGA 28610905 19.559155 220.3984 40
GGAAC 28027105 19.509142 223.72266 42
AGGAA 28298645 19.345686 220.57233 41
CGGGT 30638265 16.899954 177.6089 32
TCGGG 30631090 16.895996 177.78824 31
GGTGC 30447555 16.794758 178.17308 34
CTCCA 14895390 14.733238 99.10524 45
GGGTG 30676295 13.844229 145.3989 33
TCCAG 13250460 10.723135 60.458 45
CCAGT 12616425 10.210032 57.596424 7
CAGTC 10278795 8.31827 42.1874 43
AGTCA 9701800 7.7108393 41.633858 44
TTGGA 12391955 7.664944 123.58799 22
TCACT 7166885 6.6223264 46.632683 44
GTCAC 8180965 6.620569 42.233456 45
CACTT 6805600 6.2884927 46.65264 45
GACTG 6750500 4.469627 131.5186 11
ACTTA 4891730 4.439163 42.192837 45
CTGGA 6702515 4.4378552 40.511433 23
TCAGA 5407185 4.297546 159.4751 8
GTGGA 7846575 4.250695 23.062548 20
TGATG 6655185 4.116512 122.27528 14
TATCA 4528585 4.1096153 179.02379 6
ATGGA 6245030 4.060957 56.394196 22
CAGAC 4713725 4.010326 168.22485 9
TTATC 4597800 3.9688444 170.25328 5
ACTGA 4944775 3.9300296 157.01654 12
CTTAT 4483280 3.8699906 170.02696 4
TGTTG 6555425 3.8569627 115.31861 17
AGACT 4782745 3.801251 157.3607 10
CTGAT 5003640 3.782777 149.40619 13
ATCAG 4717795 3.7496295 157.30223 7
GTTGA 5990820 3.705574 113.1172 18
AGCTT 4899205 3.7038236 148.83705 2
TAGCT 4614790 3.4888046 148.62318 1
GCTTA 4503010 3.4042983 148.93626 3
CTTGG 5359010 3.375167 34.23901 23
ATGTT 4602890 3.2507918 139.25308 16
GATGT 4809140 2.9746552 122.20516 15
CTTAG 3888585 2.9397898 26.163664 45
TTGAC 3355650 2.5368881 86.1471 19
ACTTG 3245075 2.4532928 32.92245 22
TGACT 3062045 2.3149214 73.95615 20
TTTGG 3736980 2.1986966 50.800526 21
ACTGG 3273550 2.1674762 36.92111 22
GTAGT 3499065 2.1643188 71.140755 5
TAGGC 3224260 2.1348405 18.76036 17
TAGTA 2804780 2.0824854 85.25204 6
AGTAG 3083855 2.005339 74.69704 7
CGTGG 3577060 1.9730932 11.835297 19
TAGTT 2714560 1.9171584 68.55684 18
TTAGG 3067340 1.8972785 17.519642 45
AGGTA 2816970 1.8317915 75.99212 3
GTTGG 3531560 1.8197923 38.5782 21
AGAAC 2123755 1.7745095 59.180565 15
ATAGT 2380690 1.7676082 73.21333 17
TTGTA 2490875 1.7591807 69.07695 13
AAGAA 2115700 1.736147 58.28642 14
CTGTT 2410955 1.7337607 52.93007 19
TGTAT 2379250 1.6803457 67.004906 14
AACTG 2096805 1.6665077 55.17839 17
GTATA 2242225 1.6648012 69.40385 15
TATAG 2234535 1.6590914 69.154495 16
GACTT 2194170 1.6588036 32.453606 21
AGTTG 2656045 1.6428754 43.937687 9
CCGTG 2435500 1.6419692 13.394873 18
GGTAG 3028450 1.6405905 62.297047 4
GTTTG 2784795 1.6384674 48.500286 20
AAGCT 2016720 1.6028576 56.548393 1
TCCCG 1944505 1.6022911 18.805779 12
ACTGT 2114705 1.5987277 52.148716 18
GTAGA 2417990 1.5723468 51.731335 8
GATGG 2896290 1.5689962 41.139675 21
AGATT 2111805 1.5679673 58.37866 10
TGAGG 2878215 1.5592045 59.20294 1
GAGGT 2874940 1.5574304 63.135387 2
ATTGT 2175755 1.5366272 55.75629 12
GATTG 2470835 1.5283153 49.56232 11
AGTTT 2147940 1.5169829 50.824657 19
AGCTG 2272000 1.504332 46.71776 2
TAGAT 2018355 1.4985828 58.283463 9
CTGCC 1812775 1.4937443 58.423615 4
TGTGG 2885355 1.4868066 11.91529 20
TTGAA 1940735 1.4409516 52.952435 11
CAGTT 1866405 1.4110115 53.576935 8
AGGCA 2025150 1.409669 13.066287 45
GTTCC 1787090 1.375665 18.311352 15
GCCAG 1940315 1.3752248 50.657883 6
CCCGT 1606055 1.323405 9.7697 10
TTCCC 1405435 1.3223075 10.850272 8
CATGG 1994025 1.3202797 8.154862 23
GCTTG 2064595 1.300306 21.800478 20
TTGAT 1809980 1.2782985 47.905643 19
GAAGA 1803940 1.23322 48.47798 13
TGAAG 1896055 1.2329481 46.27821 12
AGTGG 2267570 1.2284021 19.688261 6
GGCAT 1831125 1.2124207 10.474065 44
GCTGC 1710135 1.1529415 47.561916 3
AATCC 1180200 1.1464639 27.353367 8
CTGTG 1766330 1.1124552 8.16215 21
CACGT 1353360 1.095227 9.479606 4
GGCTT 1690590 1.0647533 22.370993 19
TCACA 1084095 1.0531061 38.111904 2
CGTTC 1338170 1.0300955 8.974352 6
AGGCT 1533170 1.0151395 19.389032 18
GCTGG 1815680 1.0015224 6.4984612 21
GCTGT 1572985 0.9906844 9.409426 17
GCACT 1215010 0.9832652 22.534115 5
CCACG 1129275 0.97826535 10.029427 3
GCATC 1188005 0.96141094 12.780306 45
CATCT 1036950 0.95815986 10.696267 45
TTCAA 1051900 0.95458174 29.686506 1
TGGCT 1513945 0.95350033 22.960579 8
TCTGG 1508565 0.9501118 6.751377 8
ACGTT 1246495 0.9423564 8.773974 5
ACCAC 898930 0.9347529 13.106409 2
ACAGT 1163250 0.9245329 28.356407 4
CCTGT 1196285 0.9208754 16.217512 18
GGTGG 2030545 0.916386 5.746171 15
GCCTG 1352300 0.9116957 14.87849 17
CCAGG 1271695 0.90133125 20.061987 11
CAGGA 1288350 0.8967963 22.934721 12
CACAG 1021190 0.86880434 31.094517 3
GCTAA 1092755 0.8685045 32.22236 10
CAGTG 1300140 0.8608459 23.815744 5
GGCTA 1280065 0.8475539 23.513256 9
CACCA 800125 0.8320105 12.339983 1
AAGTA 1056445 0.82462156 25.632496 4
GGACT 1217270 0.8059763 18.569126 4
TGGTG 1560780 0.80426085 6.1034503 14
CAGAA 957955 0.800422 22.25915 15
CAAGT 1006080 0.79961663 26.236956 3
GTGGT 1537840 0.79244 6.0575504 13
TTCAC 853185 0.78835785 32.494766 1
CTAAG 986200 0.7838163 28.498957 11
AGGAT 1194960 0.77704686 21.428247 13
GGCTG 1406575 0.7758615 6.255016 20
GTAAT 1016485 0.75471705 24.681847 6
TAAGT 985240 0.73151827 26.63254 12
AAGTT 963050 0.71504277 26.090591 13
GGCCT 1058730 0.7137762 14.984991 16
ATTGC 941010 0.7114082 21.499636 2
AGTTC 940095 0.71071655 25.931822 14
ATCCA 730805 0.70991486 27.086567 9
GACCT 857090 0.69361305 5.2366014 5
TTGCA 917285 0.6934721 21.408003 3
AGTAA 879900 0.6868171 25.641167 5
TCAAG 838760 0.6666333 26.065687 2
CTTGT 924655 0.6649359 19.77371 8
TGCAC 820270 0.66381586 22.584719 4
TGCTG 1045360 0.6583799 7.4549313 16
ATAGG 1011230 0.6575726 21.739145 16
TAATC 722425 0.65558857 25.51866 7
CCGGC 906810 0.6544242 15.834947 14
TTCTG 908490 0.6533114 7.9696527 16
TATGG 1047665 0.6480248 7.7538247 22
CGGCC 891230 0.64318043 15.890681 15
CCCGG 879805 0.63493526 15.818551 13
TTGTC 873590 0.6282141 19.714504 9
AACAT 648610 0.6187952 13.017351 5
GGATA 947425 0.61608213 21.296309 14
TCCTT 700555 0.6157406 9.846347 11
GGGCT 1100770 0.60718066 6.0609584 18
GCCCA 698510 0.6051034 5.653608 29
TGGAC 913490 0.60483813 18.146011 3
GTCCC 733820 0.6046748 18.59077 11
CCCAA 581145 0.604304 13.244267 10
TTGTG 1026820 0.6041418 7.5930753 19
ATCCC 603090 0.5965247 17.336195 8
GTGGC 1080910 0.596226 20.478138 7
TCCGT 769995 0.5927262 15.119352 17
GATAG 905340 0.5887156 21.539635 15
TATTG 831910 0.5875365 15.748244 1
ACATC 592940 0.57599074 13.422338 6
TTTTG 850065 0.57106566 7.893318 14
AGCAG 810955 0.5644906 8.36461 16
AGGTT 908175 0.5617444 13.583794 10
GTCAG 847620 0.5612244 17.781755 13
CCAAA 542815 0.55434644 12.025007 11
ATCTG 730735 0.5524393 7.7626586 7
TCGGT 876235 0.5518631 7.424756 15
ATCTC 595910 0.5506312 6.6555157 45
AAGCA 658310 0.5500528 10.056388 15
CTACT 592630 0.54760045 8.705473 13
TGTCC 701855 0.5402735 16.58374 10
AAAGC 644675 0.53866 9.96407 14
ACGGA 770865 0.5365847 9.366934 3
CAAAG 639330 0.534194 12.019097 1
CATTG 705550 0.5333993 5.452465 6
GAAGG 934640 0.5322907 14.68494 17
AGAAG 774220 0.5292768 18.127235 16
AAGGC 759120 0.52840924 13.25581 18
GGTTG 1024325 0.52782863 11.449316 11
GTTGT 893795 0.525875 9.949988 12
CTGTA 692620 0.52362424 6.2557645 19
CGGAA 750370 0.52231854 8.63748 4
GAATC 657135 0.52228063 9.819546 6
TTCCG 675685 0.5201283 15.9457245 16
TAGGT 826970 0.5115157 13.332934 9
GAGTC 772230 0.51130736 17.817951 11
GTGCT 803665 0.50615764 7.3974137 15
CTCCT 536420 0.50469226 10.563508 10
CAACG 585320 0.49797642 10.327034 1
CTGGC 733165 0.4942863 6.863201 9
ACATT 543895 0.49357557 10.566821 2
TACTG 648825 0.4905149 7.088902 14
GTAGG 904415 0.48994532 12.213665 8
AAAGA 596935 0.48984584 9.169673 2
CCACC 460765 0.4878563 6.0305862 4
ACATG 612170 0.4865431 8.898135 22
GCTAC 596535 0.48275495 8.968056 2
CCCCC 447490 0.48243332 7.04502 1
GGAGT 889460 0.48184374 14.73497 10
TGGAG 880745 0.47712263 14.721688 9
TGACA 599995 0.47686666 8.712735 20
CTGTC 614810 0.47326797 9.291223 12
GTAAA 602940 0.4706325 10.644132 2
TCCCA 471450 0.46631777 11.679389 9
GCAGC 651565 0.4618056 8.3424225 17
CTACA 470620 0.45716727 11.052432 3
TTTGT 676910 0.45474175 10.3581 12
GGTCT 715615 0.45070267 5.673961 19
TCTCC 478715 0.45040032 10.713769 9
CCCAG 515190 0.44629744 5.5978646 30
ATTCC 476050 0.4398785 6.3375254 1
TGCCC 528370 0.43538204 6.3337636 28
TGTAA 585485 0.43470934 10.194868 1
AGAAT 542190 0.42321327 8.933708 4
AAACA 421690 0.42294234 13.797675 4
CTTTT 515030 0.42288464 9.203872 13
CAAAA 414785 0.41601685 12.113049 12
CCTTT 473065 0.41579223 9.857616 12
CCACT 419580 0.41501242 5.3637886 5
CGCTG 613945 0.4139104 7.128891 10
GTCGG 747660 0.4124065 6.597582 14
GTTCT 562030 0.40416586 7.8150134 15
ATCCT 435245 0.40217397 7.753741 8
ATTCA 441475 0.4006312 10.505266 4
TAAAC 418975 0.39971584 13.131331 3
AAAGT 510355 0.39836404 5.5690055 6
AAAAG 484865 0.39788103 9.872346 13
TGGGC 718260 0.39618957 6.4650803 17
GACAT 497990 0.39579466 8.735089 21
CCCAC 370345 0.39211994 5.8749046 4
CCCAT 393550 0.3892658 6.7607636 1
AGCAC 456830 0.3886602 5.728373 15
AACGC 453875 0.38614613 9.014793 8
CAGCA 453020 0.3854187 8.184834 4
CAGCT 475435 0.38475293 10.467049 18
CATTC 415210 0.38366127 10.99191 3
CGGTG 693430 0.38249344 6.549091 16
CATCC 385915 0.38171387 13.389891 7
TCTGT 521465 0.37499478 5.065377 17
AGAAA 453460 0.37211007 5.7976317 11
CCCCG 415960 0.36690196 5.16341 10
AACGG 526460 0.36645898 9.341544 2
AGACC 430190 0.3659955 5.5925074 4
CCGAC 405890 0.3516133 5.6612463 12
TAGAA 448095 0.34976625 6.311002 10
TCAAC 359480 0.34920424 10.090517 6
CTGGG 630480 0.34777045 5.0921936 16
CGACT 422965 0.34229082 6.4081783 13
CCATA 343855 0.33402586 6.8168206 2
TTCCA 345695 0.3194282 5.232381 2
TACAT 350290 0.31788233 9.934957 4
GATTT 447855 0.31629765 5.1459064 15
GTTAT 446225 0.31514648 5.886631 20
TAAAT 351185 0.3129919 5.284734 11
CCCCA 293985 0.31127024 6.362215 3
TCTCT 352325 0.3096699 5.0627637 21
TGTTT 459875 0.3089397 6.312066 19
TCCAC 309495 0.30612582 5.3232245 3
GAAGC 439670 0.30604607 6.2479663 19
TTGGG 582165 0.2999862 6.0952415 16
TGAGT 484950 0.29996195 5.8578033 19
GGTGA 549510 0.29768395 5.427542 17
AGCCC 341410 0.29575574 5.4480705 10
ACGCT 360825 0.29200307 8.304072 9
TCCCC 289730 0.2917973 5.8156023 9
GGAAG 504095 0.28708917 5.4465284 18
AAATA 305970 0.28668213 5.5052323 12
TTATG 391105 0.27621794 5.92222 21
AGAGG 475300 0.27069008 5.478043 1
AGCTA 336995 0.26783836 8.676109 1
TGTCG 424900 0.267607 7.334204 13
GTGAG 483040 0.26167542 5.091581 18
TAGAC 327980 0.26067337 5.000924 3
ATAAA 272755 0.25556093 6.3516593 4
TGTGC 399105 0.251361 7.2656364 14
TAAAG 320025 0.24979955 5.326707 5
CATAA 256230 0.24445179 6.439888 3
CATAG 300780 0.23905523 7.63741 16
CCCGA 258980 0.22434852 5.057183 11
TAGCA 221605 0.1761282 5.5021467 1
ACCTA 168870 0.16404283 5.523028 6